I would take away the transitions that occur between clicks.
I think clean and snappy is better than the cross-dissolve transitions that occur between every action. It will make the system feel more responsive to the user.
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Snappy transitions have been implemented for our next installment of Matrix. Thanks for bringing this to our attention and we look forward to rolling out the new version in 2017 which includes a whole host of user interface changes and new functionality!
Keep the feedback coming!